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Squid Ancestors Emerged in Deep Ocean 100M Years Ago, Japanese Study Finds

Squids originated 100 million years ago and survived the K–Pg extinction by retreating to deep-ocean refuges before rapidly diversifying into coastal species, researchers found.

  • Researchers at the Okinawa Institute of Science and Technology published a study in Nature Ecology & Evolution on Monday reconstructing the squid and cuttlefish evolutionary tree, revealing origins around 100 million years ago in deep-ocean habitats.
  • Following initial lineage splits in the Cretaceous, squid evolution showed limited branching for tens of millions of years—a 'long fuse' pattern of stability before a sudden explosion of diversity after the mass extinction.
  • During the Cretaceous-Paleogene mass extinction 66 million years ago, early cephalopods survived by retreating to deep, oxygen-rich refuges; surface environments were hostile, with ocean acidification likely degrading their internal shells.
  • As shallow ecosystems recovered after the extinction, squid and cuttlefish moved into newly available coastal habitats, triggering widespread diversification that explains the vast variety of modern species from giant to pygmy squids.
  • Co-Author Daniel Rokhsar stated this evolutionary framework helps link genomic changes to innovations like dynamic camouflage and intelligence, accelerating comparative genomics to study the molecular basis of unique cephalopod traits.
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Phys.org broke the news in United Kingdom on Monday, March 30, 2026.
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